CRIT/workflow: Difference between revisions
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== | ==Breast Cancer Example== | ||
===Input Data=== | |||
p-value.xls: The binding peaks of ER using ChIP-chip download from Myles Brown's Lab at: http://research4.dfci.harvard.edu/brownlab//datasets/index.php?dir=ER_MCF7_whole_human_genome/ | |||
ER_putative_target_genes.txt: map peak to genes, each rows is a peak; all genes associated are listed in a single row separated using "$" | |||
VeerData-ID.txt: microarray expression data for breast cancer | |||
Veer-Info.txt: sample information | |||
UNDER CONSTRUCTION | |||
Revision as of 20:26, 24 January 2011
Breast Cancer Example
Input Data
p-value.xls: The binding peaks of ER using ChIP-chip download from Myles Brown's Lab at: http://research4.dfci.harvard.edu/brownlab//datasets/index.php?dir=ER_MCF7_whole_human_genome/
ER_putative_target_genes.txt: map peak to genes, each rows is a peak; all genes associated are listed in a single row separated using "$" VeerData-ID.txt: microarray expression data for breast cancer Veer-Info.txt: sample information
UNDER CONSTRUCTION